# Last edited on 2008-06-15 06:26:31 by stolfi
# The Invertebrate Mitochondrial Code (transl_table=5)

#     AAs   =  FFLLSSSSYY**CCWWLLLLPPPPHHQQRRRRIIMMTTTTNNKKSSSSVVVVAAAADDEEGGGG
#   Starts  =  ---M----------------------------MMMM---------------M------------
#   Base1   =  TTTTTTTTTTTTTTTTCCCCCCCCCCCCCCCCAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGGG
#   Base2   =  TTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGGTTTTCCCCAAAAGGGG
#   Base3   =  TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG

# DEF AS
# --- --
  AAA K- # 
  AAT N- # 
  AAC N- # 
  AAG K- # Absent in Drosophila
  ATA MM # Alternate
  ATT IM # Alternate. Not in Mytilus [56]
  ATC IM # Apis [51] 
  ATG MM # Normal
  ACA T- # 
  ACT T- # 
  ACC T- # 
  ACG T- # 
  AGA S- # 
  AGT S- # 
  AGC S- # 
  AGG S- # Sometimes lysine or arginine [53]
  TAA *- # "ATAA" may be start of cytochrome oxidase subunit I [57]
  TAT Y- # 
  TAC Y- # 
  TAG *- # 
  TTA L- # 
  TTT F- # 
  TTC F- # 
  TTG LM # Ascaris, Caenorhabditis 
  TCA S- # 
  TCT S- # 
  TCC S- # 
  TCG S- # 
  TGA W- # 
  TGT C- # 
  TGC C- # 
  TGG W- # 
  CAA Q- # 
  CAT H- # 
  CAC H- # 
  CAG Q- # 
  CTA L- # 
  CTT L- # 
  CTC L- # 
  CTG L- # 
  CCA P- # 
  CCT P- # 
  CCC P- # 
  CCG P- # 
  CGA R- # 
  CGT R- # 
  CGC R- # 
  CGG R- # 
  GAA E- # 
  GAT D- # 
  GAC D- # 
  GAG E- # 
  GTA V- # 
  GTT V- # 
  GTC V- # 
  GTG VM # Polyplacophora [52]. Possibly start in Drosophila [54,55]
  GCA A- # 
  GCT A- # 
  GCC A- # 
  GCG A- # 
  GGA G- # 
  GGT G- # 
  GGC G- # 
  GGG G- # 

# [51] Crozier and Crozier, 1993
# [52] Boore and Brown, 1994 GenBank Accession Number: U09810
# [53] Abascal et al., 2006
# [54] Clary and Wolstenholme, 1985
# [55] Gadaleta et al., 1988
# [56] Hoffmann et al., 1992
# [57] Fox, 1987