# Last edited on 2008-06-06 22:59:01 by stolfi

PROG_DIR := ../..

# Window sizes to test:

WIN_SIZES := 001 003 007 015 031 063 127
  
all:
	for maxNFac in 1 3 ; do \
          for wsz in ${WIN_SIZES} ; do \
            ${MAKE} WIN_SIZE="$$wsz" MAX_N_FACTORS="$$maxNFac" single ; \
          done ; \
        done
        
########################################################################
# Section for recursive make 
# Client must define ${WIN_SIZE},${MAX_N_FACTORS}

WIN_SIZE := UNDEFINED
MAX_N_FACTORS := UNDEFINED

ifneq "/${WIN_SIZE}" "/UNDEFINED"
ifneq "/${MAX_N_FACTORS}" "/UNDEFINED"

# Mean lengths of coding and non-coding regions:

MEAN_C_LENGTH := 0150
MEAN_N_LENGTH := 0900

# min length of a homogeneous region:

MIN_LENGTH := ${WIN_SIZE}

VEV_FILE := "${WIN_SIZE}-${MIN_LENGTH}-${MEAN_C_LENGTH}-${MEAN_N_LENGTH}-${MAX_N_FACTORS}.vev"

single: ${VEV_FILE}

${VEV_FILE}: ${PROG_DIR}/dbd_enum_valid_events
	${PROG_DIR}/dbd_enum_valid_events \
            -v windowSize="${WIN_SIZE}" \
            -v tMin="${MIN_LENGTH}" \
            -v tC="${MEAN_C_LENGTH}" \
            -v tN="${MEAN_N_LENGTH}" \
            -v maxNFac="${MAX_N_FACTORS}" \
          > ${VEV_FILE}
	wc -l ${VEV_FILE}

endif
endif
# End ${WIN_SIZE},${MAX_N_FACTORS} section
########################################################################