#! /bin/bash -eu
# Last edited on 2026-04-25 06:28:58 by stolfi

out_dir="out"
mkdir -p ${out_dir}
rm -f ${out_dir}/pairs-skip-*

ex_dir="work/VoynichNinja/007"
mkdir -p ${ex_dir}
rm -f ${ex_dir}/pairs-skip-*

max_skip=10 # Maximum skip between strings

rm -f ${out_dir}/text_* ${ex_dir}/text_*
  echo "=== Investigation on string correlation across breaks ===" 1>&2

for qmap in 0 1; do
  for size in 1 2; do 
    for skip in $( count 0 ${max_skip} ); do
      compare_string_pair_probs_across_breaks.sh ${qmap} ${size} ${skip}
    done
    plot_string_pair_skip_pred.sh ${qmap} ${size} ${max_skip} 
  done
done

echo "=== done. ===" 1>&2