# Last edited on 2008-06-08 18:21:45 by stolfi

PROJECT
  Bayesian detection of coding and pseudo-coding regions in DNA/RNA

REFERENCES

  Renatha Capua, "Identificação de Regiões Codificadoras em Seqüências
  de {DNA}}". M.Sc. Dissertation, Institute of Computing, Fluminense
  federal University, 2005.
  
  Capua, Leitão and Stolfi, "Bayesian Detection of Coding Regions in
  DNA/RNA Sequences through Event Factoring", Proc. 12th CIARP, LNCS
  4756, 624--634, 2007.

SOURCES

  The sources are the final version of Renatha's programs,
  as of 2008-06-06.  The most recent file mod-date was 2006-05-23.
  
RENAMING

  The sources were renamed:
  
    pre.c          --> dbd_detect.c
    pre_more.c     --> LATER/dbd_predict_more.c
    biblioteca.h   --> dbd_lib.h
    biblioteca.c   --> dbd_lib.c
    tab.c          --> dbd_tabulate.c
    resumo_saida.c --> dbd_summarize.c
    matriz.c       --> dbd_paint.c
    
    enum-valid-events --> dbd_enum_valid_events
    plot-cn           --> dbd_plot_KN
    
    saxon/preprocess_EID.c --> dbd_preprocess_saxon.c
    
    reese/extract-bas-lab-trn --> dbd_extract_bas_lab_trn
    reese/check-translation   --> dbd_check_translation
    
    synth/synthetize-dna      --> dbd_synthesize_dna
    
    saxon/preprocess_EID.c    --> dbd_preprocess_saxon.c
    
  The remaining sources were moved to JUNK, LATER, or /dev/null.